Read 76500 records [1] "Analyzing 161016a.mr" [1] "Reading in data" Read 19125 records [1] "Approximately 85 jogs" [1] "Fixing CO2 glitches" Read 19125 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder ND12042" [1] "Position 2 Cylinder CA07857" [1] "Position 3 Cylinder D073407" [1] "Position 4 Cylinder D073408" [1] "Position 5 Cylinder CB11787" [1] "Position 6 Cylinder CA07809" [1] "Position 7 Cylinder ND19515" [1] "Position 8 Cylinder CC71581" [1] "Position 9 Cylinder ND19677" [1] "Position 10 Cylinder CA07825" [1] "Position 11 Cylinder D073409" [1] "Position 12 Cylinder CB11782" [1] "Position 13 Cylinder D801299" [1] "Position 14 Cylinder D88474" [1] "Position 15 Cylinder CB11392" [1] "Position 16 Cylinder NA" Read 16 records LIST_KNOWN: ND12042 ND19515 CC71581 ND19677 LIST_UNKNOWN: CA07857 D073407 D073408 CB11787 CA07809 CA07825 D073409 CB11782 D801299 CB11392 Read 57 records Read 16 records Read 141 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 226" [1] "Processing jog 3 at position 451" [1] "Processing jog 4 at position 676" [1] "Processing jog 5 at position 901" [1] "Processing jog 6 at position 1126" [1] "Processing jog 7 at position 1351" [1] "Processing jog 8 at position 1576" [1] "Processing jog 9 at position 1801" [1] "Processing jog 10 at position 2026" [1] "Processing jog 11 at position 2251" [1] "Processing jog 12 at position 2476" [1] "Processing jog 13 at position 2701" [1] "Processing jog 14 at position 2926" [1] "Processing jog 15 at position 3151" [1] "Processing jog 16 at position 3376" [1] "Processing jog 17 at position 3601" [1] "Processing jog 18 at position 3826" [1] "Processing jog 19 at position 4051" [1] "Processing jog 20 at position 4276" [1] "Processing jog 21 at position 4501" [1] "Processing jog 22 at position 4726" [1] "Processing jog 23 at position 4951" [1] "Processing jog 24 at position 5176" [1] "Processing jog 25 at position 5401" [1] "Processing jog 26 at position 5626" [1] "Processing jog 27 at position 5851" [1] "Processing jog 28 at position 6076" [1] "Processing jog 29 at position 6301" [1] "Processing jog 30 at position 6526" [1] "Processing jog 31 at position 6751" [1] "Processing jog 32 at position 6976" [1] "Processing jog 33 at position 7201" [1] "Processing jog 34 at position 7426" [1] "Processing jog 35 at position 7651" [1] "Processing jog 36 at position 7876" [1] "Processing jog 37 at position 8101" [1] "Processing jog 38 at position 8326" [1] "Processing jog 39 at position 8551" [1] "Processing jog 40 at position 8776" [1] "Processing jog 41 at position 9001" [1] "Processing jog 42 at position 9226" [1] "Processing jog 43 at position 9451" [1] "Processing jog 44 at position 9676" [1] "Processing jog 45 at position 9901" [1] "Processing jog 46 at position 10126" [1] "Processing jog 47 at position 10351" [1] "Processing jog 48 at position 10576" [1] "Processing jog 49 at position 10801" [1] "Processing jog 50 at position 11026" [1] "Processing jog 51 at position 11251" [1] "Processing jog 52 at position 11476" [1] "Processing jog 53 at position 11701" [1] "Processing jog 54 at position 11926" [1] "Processing jog 55 at position 12151" [1] "Processing jog 56 at position 12376" [1] "Processing jog 57 at position 12601" [1] "Processing jog 58 at position 12826" [1] "Processing jog 59 at position 13051" [1] "Processing jog 60 at position 13276" [1] "Processing jog 61 at position 13501" [1] "Processing jog 62 at position 13726" [1] "Processing jog 63 at position 13951" [1] "Processing jog 64 at position 14176" [1] "Processing jog 65 at position 14401" [1] "Processing jog 66 at position 14626" [1] "Processing jog 67 at position 14851" [1] "Processing jog 68 at position 15076" [1] "Processing jog 69 at position 15301" [1] "Processing jog 70 at position 15526" [1] "Processing jog 71 at position 15751" [1] "Processing jog 72 at position 15976" [1] "Processing jog 73 at position 16201" [1] "Processing jog 74 at position 16426" [1] "Processing jog 75 at position 16651" [1] "Processing jog 76 at position 16876" [1] "Processing jog 77 at position 17101" [1] "Processing jog 78 at position 17326" [1] "Processing jog 79 at position 17551" [1] "Processing jog 80 at position 17776" [1] "Processing jog 81 at position 18001" [1] "Processing jog 82 at position 18226" [1] "Processing jog 83 at position 18451" [1] "Processing jog 84 at position 18676" [1] "Processing jog 85 at position 18901" [1] "O2 SCL O2OFF CO2SCL CO2OFF (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 -0.76 -651.00 1.33 406.39 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 290.825648 15 0.0245176687 [2,] 290.914192 3 0.0210603215 [3,] 291.174616 4 0.0243056932 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 290.752729 2 11.14680262 [2,] 290.757938 1 5.55839088 [3,] 290.763146 2 10.34279272 [4,] 290.783980 6 10.53597512 [5,] 290.804814 10 11.20866856 [6,] 290.851690 10 11.25942222 [7,] 290.872524 6 10.50125290 [8,] 290.893358 2 10.38841761 [9,] 290.908983 2 10.35422852 [10,] 290.929817 6 10.55139833 [11,] 290.950651 10 11.29019912 [12,] 290.997528 10 11.18028708 [13,] 291.018362 6 10.45875977 [14,] 291.039195 2 10.30136903 [15,] 291.054821 2 10.36882687 [16,] 291.075655 6 10.43690402 [17,] 291.096489 10 11.18039784 [18,] 291.143365 10 11.20627848 [19,] 291.164199 6 10.45086151 [20,] 291.185033 2 10.32630813 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2 SCL O2OFF CO2SCL CO2OFF (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.76 -650.97 1.29 406.00 [1] "plotting CO2 time series" [1] "plotting O2 time series" [1] "plotting CO2 flushing effect" [1] "plotting O2 flushing effect" [1] "o2 flushing effect zero adjustment fit did not converge for pos 7" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html" [1] "ND12042" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CA07857" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073407" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073408" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CB11787" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CA07809" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "ND19515" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CC71581" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "ND19677" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CA07825" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073409" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CB11782" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D801299" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CB11392" Read 1245 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html"