Read 76500 records [1] "Analyzing 161028a.mr" [1] "Reading in data" Read 19125 records [1] "Approximately 85 jogs" [1] "Fixing CO2 glitches" Read 19125 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder ND12042" [1] "Position 2 Cylinder CA07857" [1] "Position 3 Cylinder D842554" [1] "Position 4 Cylinder D88471" [1] "Position 5 Cylinder D88474" [1] "Position 6 Cylinder CA07809" [1] "Position 7 Cylinder ND19515" [1] "Position 8 Cylinder CC71581" [1] "Position 9 Cylinder ND19677" [1] "Position 10 Cylinder CA07825" [1] "Position 11 Cylinder D073409" [1] "Position 12 Cylinder D073418" [1] "Position 13 Cylinder D801299" [1] "Position 14 Cylinder D089507" [1] "Position 15 Cylinder D073419" [1] "Position 16 Cylinder NA" Read 16 records LIST_KNOWN: ND12042 ND19515 CC71581 ND19677 LIST_UNKNOWN: CA07857 D842554 D88471 D88474 CA07809 CA07825 D073409 D073418 D801299 D073419 Read 57 records Read 16 records Read 141 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 226" [1] "Processing jog 3 at position 451" [1] "Processing jog 4 at position 676" [1] "Processing jog 5 at position 901" [1] "Processing jog 6 at position 1126" [1] "Processing jog 7 at position 1351" [1] "Processing jog 8 at position 1576" [1] "Processing jog 9 at position 1801" [1] "Processing jog 10 at position 2026" [1] "Processing jog 11 at position 2251" [1] "Processing jog 12 at position 2476" [1] "Processing jog 13 at position 2701" [1] "Processing jog 14 at position 2926" [1] "Processing jog 15 at position 3151" [1] "Processing jog 16 at position 3376" [1] "Processing jog 17 at position 3601" [1] "Processing jog 18 at position 3826" [1] "Processing jog 19 at position 4051" [1] "Processing jog 20 at position 4276" [1] "Processing jog 21 at position 4501" [1] "Processing jog 22 at position 4726" [1] "Processing jog 23 at position 4951" [1] "Processing jog 24 at position 5176" [1] "Processing jog 25 at position 5401" [1] "Processing jog 26 at position 5626" [1] "Processing jog 27 at position 5851" [1] "Processing jog 28 at position 6076" [1] "Processing jog 29 at position 6301" [1] "Processing jog 30 at position 6526" [1] "Processing jog 31 at position 6751" [1] "Processing jog 32 at position 6976" [1] "Processing jog 33 at position 7201" [1] "Processing jog 34 at position 7426" [1] "Processing jog 35 at position 7651" [1] "Processing jog 36 at position 7876" [1] "Processing jog 37 at position 8101" [1] "Processing jog 38 at position 8326" [1] "Processing jog 39 at position 8551" [1] "Processing jog 40 at position 8776" [1] "Processing jog 41 at position 9001" [1] "Processing jog 42 at position 9226" [1] "Processing jog 43 at position 9451" [1] "Processing jog 44 at position 9676" [1] "Processing jog 45 at position 9901" [1] "Processing jog 46 at position 10126" [1] "Processing jog 47 at position 10351" [1] "Processing jog 48 at position 10576" [1] "Processing jog 49 at position 10801" [1] "Processing jog 50 at position 11026" [1] "Processing jog 51 at position 11251" [1] "Processing jog 52 at position 11476" [1] "Processing jog 53 at position 11701" [1] "Processing jog 54 at position 11926" [1] "Processing jog 55 at position 12151" [1] "Processing jog 56 at position 12376" [1] "Processing jog 57 at position 12601" [1] "Processing jog 58 at position 12826" [1] "Processing jog 59 at position 13051" [1] "Processing jog 60 at position 13276" [1] "Processing jog 61 at position 13501" [1] "Processing jog 62 at position 13726" [1] "Processing jog 63 at position 13951" [1] "Processing jog 64 at position 14176" [1] "Processing jog 65 at position 14401" [1] "Processing jog 66 at position 14626" [1] "Processing jog 67 at position 14851" [1] "Processing jog 68 at position 15076" [1] "Processing jog 69 at position 15301" [1] "Processing jog 70 at position 15526" [1] "Processing jog 71 at position 15751" [1] "Processing jog 72 at position 15976" [1] "Processing jog 73 at position 16201" [1] "Processing jog 74 at position 16426" [1] "Processing jog 75 at position 16651" [1] "Processing jog 76 at position 16876" [1] "Processing jog 77 at position 17101" [1] "Processing jog 78 at position 17326" [1] "Processing jog 79 at position 17551" [1] "Processing jog 80 at position 17776" [1] "Processing jog 81 at position 18001" [1] "Processing jog 82 at position 18226" [1] "Processing jog 83 at position 18451" [1] "Processing jog 84 at position 18676" [1] "Processing jog 85 at position 18901" [1] "O2 SCL O2OFF CO2SCL CO2OFF (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 -0.77 -648.86 1.36 406.40 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 302.792613 2 0.0215108717 [2,] 302.813447 4 0.0205140781 [3,] 302.922825 4 0.0655076695 [4,] 302.933242 2 0.0280487808 [5,] 302.959284 4 0.0309971052 [6,] 303.063454 5 0.0211085706 [7,] 303.068662 4 0.0566943033 [8,] 303.105122 4 0.0286307856 [9,] 303.214503 4 0.0324156696 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 302.792613 2 14.78033881 [2,] 302.797821 1 5.14211306 [3,] 302.803030 2 11.83745259 [4,] 302.823864 6 10.60721465 [5,] 302.844698 10 11.31655687 [6,] 302.891574 10 11.28921315 [7,] 302.912408 6 10.57422180 [8,] 302.922825 4 4.26135057 [9,] 302.933242 2 10.38894824 [10,] 302.948867 2 10.47128971 [11,] 302.969701 6 10.49625864 [12,] 302.990535 10 11.32415241 [13,] 303.037411 10 11.26209722 [14,] 303.058245 6 10.51991772 [15,] 303.079079 2 10.41037889 [16,] 303.094705 2 10.44390333 [17,] 303.115539 6 10.50690819 [18,] 303.136372 10 11.19264374 [19,] 303.183252 10 11.23497151 [20,] 303.204086 6 10.54606074 [21,] 303.224920 2 10.35747589 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2 SCL O2OFF CO2SCL CO2OFF (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.77 -648.86 1.32 406.01 [1] "plotting CO2 time series" [1] "plotting O2 time series" [1] "plotting CO2 flushing effect" [1] "plotting O2 flushing effect" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html" [1] "ND12042" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CA07857" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D842554" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D88471" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D88474" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CA07809" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "ND19515" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CC71581" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "ND19677" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CA07825" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073409" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073418" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D801299" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073419" Read 1289 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html"