Read 65700 records [1] "Analyzing 170328b.mr" [1] "Reading in data" Read 16425 records [1] "Approximately 73 jogs" [1] "Fixing CO2 glitches" Read 16425 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder ND12042" [1] "Position 2 Cylinder CA07857" [1] "Position 3 Cylinder D073409" [1] "Position 4 Cylinder D596278" [1] "Position 5 Cylinder D089507" [1] "Position 6 Cylinder CA07809" [1] "Position 7 Cylinder ND19515" [1] "Position 8 Cylinder CC71581" [1] "Position 9 Cylinder ND19677" [1] "Position 10 Cylinder CA07825" [1] "Position 11 Cylinder D073406" [1] "Position 12 Cylinder D073418" [1] "Position 13 Cylinder D801299" [1] "Position 14 Cylinder NA" [1] "Position 15 Cylinder D073419" [1] "Position 16 Cylinder NA" Read 16 records LIST_KNOWN: CA07857 CA07809 CC71581 CA07825 LIST_UNKNOWN: ND12042 D596278 ND19515 ND19677 D073406 D073418 D801299 D073419 Read 57 records Read 16 records Read 141 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 226" [1] "Processing jog 3 at position 451" [1] "Processing jog 4 at position 676" [1] "Processing jog 5 at position 901" [1] "Processing jog 6 at position 1126" [1] "Processing jog 7 at position 1351" [1] "Processing jog 8 at position 1576" [1] "Processing jog 9 at position 1801" [1] "Processing jog 10 at position 2026" [1] "Processing jog 11 at position 2251" [1] "Processing jog 12 at position 2476" [1] "Processing jog 13 at position 2701" [1] "Processing jog 14 at position 2926" [1] "Processing jog 15 at position 3151" [1] "Processing jog 16 at position 3376" [1] "Processing jog 17 at position 3601" [1] "Processing jog 18 at position 3826" [1] "Processing jog 19 at position 4051" [1] "Processing jog 20 at position 4276" [1] "Processing jog 21 at position 4501" [1] "Processing jog 22 at position 4726" [1] "Processing jog 23 at position 4951" [1] "Processing jog 24 at position 5176" [1] "Processing jog 25 at position 5401" [1] "Processing jog 26 at position 5626" [1] "Processing jog 27 at position 5851" [1] "Processing jog 28 at position 6076" [1] "Processing jog 29 at position 6301" [1] "Processing jog 30 at position 6526" [1] "Processing jog 31 at position 6751" [1] "Processing jog 32 at position 6976" [1] "Processing jog 33 at position 7201" [1] "Processing jog 34 at position 7426" [1] "Processing jog 35 at position 7651" [1] "Processing jog 36 at position 7876" [1] "Processing jog 37 at position 8101" [1] "Processing jog 38 at position 8326" [1] "Processing jog 39 at position 8551" [1] "Processing jog 40 at position 8776" [1] "Processing jog 41 at position 9001" [1] "Processing jog 42 at position 9226" [1] "Processing jog 43 at position 9451" [1] "Processing jog 44 at position 9676" [1] "Processing jog 45 at position 9901" [1] "Processing jog 46 at position 10126" [1] "Processing jog 47 at position 10351" [1] "Processing jog 48 at position 10576" [1] "Processing jog 49 at position 10801" [1] "Processing jog 50 at position 11026" [1] "Processing jog 51 at position 11251" [1] "Processing jog 52 at position 11476" [1] "Processing jog 53 at position 11701" [1] "Processing jog 54 at position 11926" [1] "Processing jog 55 at position 12151" [1] "Processing jog 56 at position 12376" [1] "Processing jog 57 at position 12601" [1] "Processing jog 58 at position 12826" [1] "Processing jog 59 at position 13051" [1] "Processing jog 60 at position 13276" [1] "Processing jog 61 at position 13501" [1] "Processing jog 62 at position 13726" [1] "Processing jog 63 at position 13951" [1] "Processing jog 64 at position 14176" [1] "Processing jog 65 at position 14401" [1] "Processing jog 66 at position 14626" [1] "Processing jog 67 at position 14851" [1] "Processing jog 68 at position 15076" [1] "Processing jog 69 at position 15301" [1] "Processing jog 70 at position 15526" [1] "Processing jog 71 at position 15751" [1] "Processing jog 72 at position 15976" [1] "Processing jog 73 at position 16201" [1] "O2 SCL O2OFF CO2SCL CO2OFF (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 -0.78 -803.19 1.29 397.58 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 87.7755903 13 0.0206843336 [2,] 87.8172580 8 0.0232216445 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 87.7287139 2 132.7715086 [2,] 87.7391309 6 159.1631966 [3,] 87.7443394 7 121.2469109 [4,] 87.7651733 11 117.9483731 [5,] 87.7755903 13 101.7183859 [6,] 87.7807988 15 163.9887943 [7,] 87.7860072 15 81.0745539 [8,] 87.7912156 13 51.9398849 [9,] 87.7964241 12 84.4489995 [10,] 87.8016327 11 79.4660224 [11,] 87.8068412 10 60.7625427 [12,] 87.8172580 8 53.4433019 [13,] 87.8224666 7 90.1496750 [14,] 87.8276751 6 40.4155045 [15,] 87.8328836 4 114.2290439 [16,] 87.8380920 2 60.1320201 [17,] 87.8433004 1 121.6794160 [18,] 87.8485089 1 154.9010979 [19,] 87.8537174 2 80.5203098 [20,] 87.8589260 4 82.6981922 [21,] 87.8641345 6 147.2351213 [22,] 87.8693429 7 104.5749934 [23,] 87.8745513 8 61.3700703 [24,] 87.8797599 9 48.4502222 [25,] 87.8849683 10 22.8147529 [26,] 87.8901769 11 104.2651478 [27,] 87.8953853 12 85.5652957 [28,] 87.9058022 15 52.9291739 [29,] 87.9110107 15 56.1537484 [30,] 87.9370531 9 21.8902424 [31,] 87.9422616 8 49.6061724 [32,] 87.9474701 7 50.6631108 [33,] 87.9526785 6 68.0958271 [34,] 87.9578870 4 60.5011453 [35,] 87.9630955 2 69.4301462 [36,] 87.9683040 1 109.7551620 [37,] 87.9735126 1 126.4518759 [38,] 87.9787210 2 34.4429871 [39,] 87.9839294 4 34.3734635 [40,] 87.9891379 6 36.2586642 [41,] 87.9943464 7 38.7223689 [42,] 87.9995549 8 173.2502577 [43,] 88.0047634 9 207.2252534 [44,] 88.0099718 10 214.1315481 [45,] 88.0151803 11 204.5038801 [46,] 88.0203888 12 122.4493377 [47,] 88.0255973 13 161.6199502 [48,] 88.0308059 15 107.2158712 [49,] 88.0360143 15 141.4140602 [50,] 88.0412227 13 54.3866506 [51,] 88.0464312 12 83.7769693 [52,] 88.0516397 11 51.3203717 [53,] 88.0568482 10 30.2190727 [54,] 88.0620567 9 43.0997996 [55,] 88.0672651 8 68.0253855 [56,] 88.0724736 7 129.5733783 [57,] 88.0776821 6 40.6961981 [58,] 88.0828906 4 62.9541262 [59,] 88.0880991 2 79.1159403 [60,] 88.0933075 1 117.3338439 [1] "All knowns in pos 6 screened for O2 - not using" [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2 SCL O2OFF CO2SCL CO2OFF (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.79 -794.91 1.28 397.79 [1] "plotting CO2 time series" [1] "plotting O2 time series" [1] "plotting CO2 flushing effect" [1] "plotting O2 flushing effect" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html"