Read 101700 records [1] "Analyzing 180803a.mr" [1] "Reading in data" Read 25425 records [1] "Approximately 113 jogs" [1] "Fixing CO2 glitches" Read 25425 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder D88529" [1] "Position 2 Cylinder D88532" [1] "Position 3 Cylinder D089507" [1] "Position 4 Cylinder D801299" [1] "Position 5 Cylinder CC203963" [1] "Position 6 Cylinder D596274" [1] "Position 7 Cylinder D073409" [1] "Position 8 Cylinder D073419" [1] "Position 9 Cylinder CC203987" [1] "Position 10 Cylinder D169300" [1] "Position 11 Cylinder D273555" [1] "Position 12 Cylinder D073418" [1] "Position 13 Cylinder D801298" [1] "Position 14 Cylinder D273559" [1] "Position 15 Cylinder D743656" [1] "Position 16 Cylinder NA" Read 16 records LIST_KNOWN: D089507 D801299 D073409 D073419 D073418 LIST_UNKNOWN: D88532 CC203963 D596274 CC203987 D169300 D273555 D801298 D273559 D743656 Read 57 records Read 16 records Read 141 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 226" [1] "Processing jog 3 at position 451" [1] "Processing jog 4 at position 676" [1] "Processing jog 5 at position 901" [1] "Processing jog 6 at position 1126" [1] "Processing jog 7 at position 1351" [1] "Processing jog 8 at position 1576" [1] "Processing jog 9 at position 1801" [1] "Processing jog 10 at position 2026" [1] "Processing jog 11 at position 2251" [1] "Processing jog 12 at position 2476" [1] "Processing jog 13 at position 2701" [1] "Processing jog 14 at position 2926" [1] "Processing jog 15 at position 3151" [1] "Processing jog 16 at position 3376" [1] "Processing jog 17 at position 3601" [1] "Processing jog 18 at position 3826" [1] "Processing jog 19 at position 4051" [1] "Processing jog 20 at position 4276" [1] "Processing jog 21 at position 4501" [1] "Processing jog 22 at position 4726" [1] "Processing jog 23 at position 4951" [1] "Processing jog 24 at position 5176" [1] "Processing jog 25 at position 5401" [1] "Processing jog 26 at position 5626" [1] "Processing jog 27 at position 5851" [1] "Processing jog 28 at position 6076" [1] "Processing jog 29 at position 6301" [1] "Processing jog 30 at position 6526" [1] "Processing jog 31 at position 6751" [1] "Processing jog 32 at position 6976" [1] "Processing jog 33 at position 7201" [1] "Processing jog 34 at position 7426" [1] "Processing jog 35 at position 7651" [1] "Processing jog 36 at position 7876" [1] "Processing jog 37 at position 8101" [1] "Processing jog 38 at position 8326" [1] "Processing jog 39 at position 8551" [1] "Processing jog 40 at position 8776" [1] "Processing jog 41 at position 9001" [1] "Processing jog 42 at position 9226" [1] "Processing jog 43 at position 9451" [1] "Processing jog 44 at position 9676" [1] "Processing jog 45 at position 9901" [1] "Processing jog 46 at position 10126" [1] "Processing jog 47 at position 10351" [1] "Processing jog 48 at position 10576" [1] "Processing jog 49 at position 10801" [1] "Processing jog 50 at position 11026" [1] "Processing jog 51 at position 11251" [1] "Processing jog 52 at position 11476" [1] "Processing jog 53 at position 11701" [1] "Processing jog 54 at position 11926" [1] "Processing jog 55 at position 12151" [1] "Processing jog 56 at position 12376" [1] "Processing jog 57 at position 12601" [1] "Processing jog 58 at position 12826" [1] "Processing jog 59 at position 13051" [1] "Processing jog 60 at position 13276" [1] "Processing jog 61 at position 13501" [1] "Processing jog 62 at position 13726" [1] "Processing jog 63 at position 13951" [1] "Processing jog 64 at position 14176" [1] "Processing jog 65 at position 14401" [1] "Processing jog 66 at position 14626" [1] "Processing jog 67 at position 14851" [1] "Processing jog 68 at position 15076" [1] "Processing jog 69 at position 15301" [1] "Processing jog 70 at position 15526" [1] "Processing jog 71 at position 15751" [1] "Processing jog 72 at position 15976" [1] "Processing jog 73 at position 16201" [1] "Processing jog 74 at position 16426" [1] "Processing jog 75 at position 16651" [1] "Processing jog 76 at position 16876" [1] "Processing jog 77 at position 17101" [1] "Processing jog 78 at position 17326" [1] "Processing jog 79 at position 17551" [1] "Processing jog 80 at position 17776" [1] "Processing jog 81 at position 18001" [1] "Processing jog 82 at position 18226" [1] "Processing jog 83 at position 18451" [1] "Processing jog 84 at position 18676" [1] "Processing jog 85 at position 18901" [1] "Processing jog 86 at position 19126" [1] "Processing jog 87 at position 19351" [1] "Processing jog 88 at position 19576" [1] "Processing jog 89 at position 19801" [1] "Processing jog 90 at position 20026" [1] "Processing jog 91 at position 20251" [1] "Processing jog 92 at position 20476" [1] "Processing jog 93 at position 20701" [1] "Processing jog 94 at position 20926" [1] "Processing jog 95 at position 21151" [1] "Processing jog 96 at position 21376" [1] "Processing jog 97 at position 21601" [1] "Processing jog 98 at position 21826" [1] "Processing jog 99 at position 22051" [1] "Processing jog 100 at position 22276" [1] "Processing jog 101 at position 22501" [1] "Processing jog 102 at position 22726" [1] "Processing jog 103 at position 22951" [1] "Processing jog 104 at position 23176" [1] "Processing jog 105 at position 23401" [1] "Processing jog 106 at position 23626" [1] "Processing jog 107 at position 23851" [1] "Processing jog 108 at position 24076" [1] "Processing jog 109 at position 24301" [1] "Processing jog 110 at position 24526" [1] "Processing jog 111 at position 24751" [1] "Processing jog 112 at position 24976" [1] "Processing jog 113 at position 25201" [1] "O2 SCL O2OFF CO2SCL CO2OFF (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 -0.67 -731.58 1.29 397.49 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 215.771320 3 0.0262120587 [2,] 215.786946 4 0.0276717475 [3,] 215.797362 6 0.0202156496 [4,] 215.807780 8 0.0794322323 [5,] 215.823405 11 0.0369285080 [6,] 215.828613 12 0.0608037063 [7,] 215.839030 14 0.0729871646 [8,] 215.885907 8 0.0369851700 [9,] 215.906741 4 0.0240318153 [10,] 215.911949 3 0.0205570234 [11,] 215.984868 14 0.0436494314 [12,] 216.031744 8 0.0201648787 [13,] 216.052578 4 0.0200110471 [14,] 216.130705 14 0.0275226945 [15,] 216.276543 14 0.0220916076 [16,] 216.323419 8 0.0205092962 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 215.771320 3 19.64297292 [2,] 215.786946 4 31.62946563 [3,] 215.797362 6 9.04372488 [4,] 215.807780 8 168.68593574 [5,] 215.823405 11 25.31354532 [6,] 215.828613 12 82.15323531 [7,] 215.839030 14 166.43166832 [8,] 215.854656 14 7.25398900 [9,] 215.865073 12 8.99597957 [10,] 215.870281 11 4.82051422 [11,] 215.885907 8 29.03098305 [12,] 215.891115 7 4.11009947 [13,] 215.906741 4 25.47917852 [14,] 215.911949 3 19.97204855 [15,] 215.932783 4 6.16929380 [16,] 215.953617 8 16.22768882 [17,] 215.969242 11 4.20226410 [18,] 215.974451 12 16.06877590 [19,] 215.984868 14 37.20391008 [20,] 216.010910 12 4.92913228 [21,] 216.031744 8 13.47037457 [22,] 216.052578 4 17.93436335 [23,] 216.057787 3 13.79448031 [24,] 216.078621 4 4.54788072 [25,] 216.099454 8 9.49352436 [26,] 216.120289 12 9.28210678 [27,] 216.130705 14 19.37185174 [28,] 216.177582 8 8.81490470 [29,] 216.198416 4 14.20639079 [30,] 216.203624 3 11.05994274 [31,] 216.245292 8 6.78914561 [32,] 216.266126 12 7.09243208 [33,] 216.276543 14 12.99385109 [34,] 216.323419 8 7.14846397 [35,] 216.344253 4 10.87442398 [36,] 216.349462 3 9.83533553 [1] "All knowns in pos 8 screened for O2 - not using" [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2 SCL O2OFF CO2SCL CO2OFF (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.81 -775.89 1.29 397.69 [1] "plotting CO2 time series" [1] "plotting O2 time series" [1] "plotting CO2 flushing effect" [1] "plotting O2 flushing effect" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html" [1] "D88532" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D089507" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D801299" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CC203963" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D596274" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073409" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073419" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CC203987" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D169300" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D273555" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073418" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D801298" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D273559" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D743656" Read 1909 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html"