Read 99900 records [1] "Analyzing 191219a.mr" [1] "Reading in data" Read 24975 records [1] "Approximately 111 jogs" [1] "Fixing CO2 glitches" Read 24975 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder CC78691" [1] "Position 2 Cylinder CC71581" [1] "Position 3 Cylinder D089507" [1] "Position 4 Cylinder D801299" [1] "Position 5 Cylinder NA" [1] "Position 6 Cylinder ND29112" [1] "Position 7 Cylinder D073409" [1] "Position 8 Cylinder D073419" [1] "Position 9 Cylinder D399093" [1] "Position 10 Cylinder D269489" [1] "Position 11 Cylinder D273555" [1] "Position 12 Cylinder D073418" [1] "Position 13 Cylinder D801298" [1] "Position 14 Cylinder D273559" [1] "Position 15 Cylinder D269491" [1] "Position 16 Cylinder NA" Read 16 records LIST_KNOWN: D089507 D801299 D073409 D073419 D073418 LIST_UNKNOWN: CC78691 ND29112 D399093 D273555 D801298 D273559 Read 57 records Read 16 records Read 141 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 226" [1] "Processing jog 3 at position 451" [1] "Processing jog 4 at position 676" [1] "Processing jog 5 at position 901" [1] "Processing jog 6 at position 1126" [1] "Processing jog 7 at position 1351" [1] "Processing jog 8 at position 1576" [1] "Processing jog 9 at position 1801" [1] "Processing jog 10 at position 2026" [1] "Processing jog 11 at position 2251" [1] "Processing jog 12 at position 2476" [1] "Processing jog 13 at position 2701" [1] "Processing jog 14 at position 2926" [1] "Processing jog 15 at position 3151" [1] "Processing jog 16 at position 3376" [1] "Processing jog 17 at position 3601" [1] "Processing jog 18 at position 3826" [1] "Processing jog 19 at position 4051" [1] "Processing jog 20 at position 4276" [1] "Processing jog 21 at position 4501" [1] "Processing jog 22 at position 4726" [1] "Processing jog 23 at position 4951" [1] "Processing jog 24 at position 5176" [1] "Processing jog 25 at position 5401" [1] "Processing jog 26 at position 5626" [1] "Processing jog 27 at position 5851" [1] "Processing jog 28 at position 6076" [1] "Processing jog 29 at position 6301" [1] "Processing jog 30 at position 6526" [1] "Processing jog 31 at position 6751" [1] "Processing jog 32 at position 6976" [1] "Processing jog 33 at position 7201" [1] "Processing jog 34 at position 7426" [1] "Processing jog 35 at position 7651" [1] "Processing jog 36 at position 7876" [1] "Processing jog 37 at position 8101" [1] "Processing jog 38 at position 8326" [1] "Processing jog 39 at position 8551" [1] "Processing jog 40 at position 8776" [1] "Processing jog 41 at position 9001" [1] "Processing jog 42 at position 9226" [1] "Processing jog 43 at position 9451" [1] "Processing jog 44 at position 9676" [1] "Processing jog 45 at position 9901" [1] "Processing jog 46 at position 10126" [1] "Processing jog 47 at position 10351" [1] "Processing jog 48 at position 10576" [1] "Processing jog 49 at position 10801" [1] "Processing jog 50 at position 11026" [1] "Processing jog 51 at position 11251" [1] "Processing jog 52 at position 11476" [1] "Processing jog 53 at position 11701" [1] "Processing jog 54 at position 11926" [1] "Processing jog 55 at position 12151" [1] "Processing jog 56 at position 12376" [1] "Processing jog 57 at position 12601" [1] "Processing jog 58 at position 12826" [1] "Processing jog 59 at position 13051" [1] "Processing jog 60 at position 13276" [1] "Processing jog 61 at position 13501" [1] "Processing jog 62 at position 13726" [1] "Processing jog 63 at position 13951" [1] "Processing jog 64 at position 14176" [1] "Processing jog 65 at position 14401" [1] "Processing jog 66 at position 14626" [1] "Processing jog 67 at position 14851" [1] "Processing jog 68 at position 15076" [1] "Processing jog 69 at position 15301" [1] "Processing jog 70 at position 15526" [1] "Processing jog 71 at position 15751" [1] "Processing jog 72 at position 15976" [1] "Processing jog 73 at position 16201" [1] "Processing jog 74 at position 16426" [1] "Processing jog 75 at position 16651" [1] "Processing jog 76 at position 16876" [1] "Processing jog 77 at position 17101" [1] "Processing jog 78 at position 17326" [1] "Processing jog 79 at position 17551" [1] "Processing jog 80 at position 17776" [1] "Processing jog 81 at position 18001" [1] "Processing jog 82 at position 18226" [1] "Processing jog 83 at position 18451" [1] "Processing jog 84 at position 18676" [1] "Processing jog 85 at position 18901" [1] "Processing jog 86 at position 19126" [1] "Processing jog 87 at position 19351" [1] "Processing jog 88 at position 19576" [1] "Processing jog 89 at position 19801" [1] "Processing jog 90 at position 20026" [1] "Processing jog 91 at position 20251" [1] "Processing jog 92 at position 20476" [1] "Processing jog 93 at position 20701" [1] "Processing jog 94 at position 20926" [1] "Processing jog 95 at position 21151" [1] "Processing jog 96 at position 21376" [1] "Processing jog 97 at position 21601" [1] "Processing jog 98 at position 21826" [1] "Processing jog 99 at position 22051" [1] "Processing jog 100 at position 22276" [1] "Processing jog 101 at position 22501" [1] "Processing jog 102 at position 22726" [1] "Processing jog 103 at position 22951" [1] "Processing jog 104 at position 23176" [1] "Processing jog 105 at position 23401" [1] "Processing jog 106 at position 23626" [1] "Processing jog 107 at position 23851" [1] "Processing jog 108 at position 24076" [1] "Processing jog 109 at position 24301" [1] "Processing jog 110 at position 24526" [1] "Processing jog 111 at position 24751" [1] "O2 SCL O2OFF CO2SCL CO2OFF (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 -0.79 -881.34 1.28 406.48 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] [1,] 353.634991 3 0.0272893733 [2,] 353.692284 14 0.0202775306 [3,] 353.775620 7 0.0204770630 [4,] 353.791246 11 0.0205132537 [5,] 353.801663 13 0.0200088458 [6,] 353.817288 13 0.0217198111 [7,] 353.827705 11 0.0223218392 [8,] 353.838122 8 0.0229785486 [9,] 353.905832 11 0.0237288669 [10,] 353.931875 13 0.0220192562 [11,] 354.041253 14 0.0233813675 [12,] 354.202716 3 0.0215874095 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 353.634991 3 40.84757395 [2,] 353.645408 3 4.66276504 [3,] 353.661034 7 5.98604418 [4,] 353.671451 9 5.56975184 [5,] 353.697493 14 4.06911745 [6,] 353.702701 13 4.58916912 [7,] 353.713118 11 4.69493249 [8,] 353.723535 8 5.91270790 [9,] 353.749578 1 4.46072876 [10,] 353.754786 1 4.45240001 [11,] 353.770412 6 5.10082599 [12,] 353.775620 7 4.60751363 [13,] 353.786037 9 5.44029668 [14,] 353.827705 11 5.10138185 [15,] 353.832913 9 21.10127529 [16,] 353.838122 8 6.63002239 [17,] 353.843330 7 7.45202236 [18,] 353.848539 6 10.22229793 [19,] 353.858956 3 10.29313426 [20,] 353.864164 1 4.72519681 [21,] 353.869373 1 5.03981383 [22,] 353.874581 3 6.63144568 [23,] 353.879790 4 4.33414618 [24,] 353.884998 6 6.28198486 [25,] 353.895415 8 5.53912137 [26,] 353.900624 9 6.09558617 [27,] 353.905832 11 7.25398130 [28,] 353.911041 12 5.22967496 [29,] 353.916249 13 4.21820986 [30,] 353.937083 12 4.13649190 [31,] 353.942291 11 6.04988388 [32,] 353.947500 9 5.85245795 [33,] 353.952709 8 4.18666385 [34,] 353.957917 7 4.61896773 [35,] 353.963125 6 5.04789622 [36,] 353.978751 1 4.18186360 [37,] 353.983959 1 5.97658705 [38,] 354.025627 12 4.52050723 [39,] 354.041253 14 4.06687452 [40,] 354.051670 12 4.46771245 [41,] 354.077712 6 5.30985626 [42,] 354.082920 4 7.83793866 [43,] 354.088129 3 18.51990424 [44,] 354.103754 3 5.22905834 [45,] 354.108963 4 6.00426950 [46,] 354.114171 6 4.88271646 [47,] 354.119380 7 9.01832346 [48,] 354.129797 9 7.48773358 [49,] 354.135005 11 4.31874173 [50,] 354.140214 12 4.96159317 [51,] 354.150631 14 5.07808103 [52,] 354.166256 12 4.63353101 [53,] 354.171465 11 6.12570861 [54,] 354.187090 7 4.04424359 [55,] 354.192299 6 6.61330405 [56,] 354.197507 4 7.81147446 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2 SCL O2OFF CO2SCL CO2OFF (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.79 -881.75 1.28 406.68 [1] "plotting CO2 time series" [1] "plotting O2 time series" [1] "plotting CO2 flushing effect" [1] "plotting O2 flushing effect" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html" [1] "CC78691" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D089507" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D801299" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "ND29112" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073409" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073419" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D399093" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D273555" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D073418" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D801298" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D273559" Read 2136 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html"