Read 4500 records
[1] "Analyzing  130405a.mr"
[1] "Reading in data"
Read 1125 records
[1] "Approximately  5  jogs"
[1] "Fixing CO2 glitches"
Read 1125 records
[1] "MAX CO2 DIFFERENCE  1.036  PPM"
[1] "Finding cylinder IDs"
[1] "Position  1    Cylinder  ND12042"
[1] "Position  2    Cylinder  CC177837"
[1] "Position  3    Cylinder  CC177841"
[1] "Position  4    Cylinder  NA"
[1] "Position  5    Cylinder  D111111"
[1] "Position  6    Cylinder  CC178444"
[1] "Position  7    Cylinder  ND19515"
[1] "Position  8    Cylinder  CA07825"
[1] "Position  9    Cylinder  ND19677"
[1] "Position  10    Cylinder  CA07857"
[1] "Position  11    Cylinder  NA"
[1] "Position  12    Cylinder  CA07809"
[1] "Position  13    Cylinder  NA"
[1] "Position  14    Cylinder  NA"
[1] "Position  15    Cylinder  NA"
[1] "Position  16    Cylinder  NA"
Read 16 records
LIST_KNOWN: ND12042 CC177841 ND19515 ND19677 
LIST_UNKNOWN: D111111 
Read 57 records
Read 16 records
Read 141 records
[1] "Known cylinder CC177841 SIO CO2 not found in assigned primaries or secondaries"
[1] "Known cylinder CC177841 GMD CO2 not found in assigned primaries or secondaries"
[1] "Known cylinder CC177841 SIO O2 not found in assigned primaries or secondaries"
Read 2 items
[1] "Processing jog 1 at position 1"
[1] "Processing jog 2 at position 226"
[1] "Processing jog 3 at position 451"
[1] "Processing jog 4 at position 676"
[1] "Processing jog 5 at position 901"
[1] "O2 SCL  O2OFF  CO2SCL  CO2OFF (1ST ESTIMATE FROM MEAN FIT)"
        X Intercept        x2        x1 
    -0.24   -773.22      2.90    392.32 
[1] "Screened jogs for high O2 standard deviation:"
        [,1] [,2]       [,3]
X 95.4838342    3 30.9426076
[1] "All knowns in pos 3 screened for O2 - not using"
[1] "calculating fits"
[1] "plotting CO2 cal parameters"
[1] "plotting O2 cal parameters"
[1] "calculating final numbers"
[1] "O2 SCL  O2OFF  CO2SCL  CO2OFF (2ND ESTIMATE FROM MEAN OF ALL FITS)"
[1]   -0.24 -773.22    2.88  392.18
[1] "plotting CO2 time series"
[1] "plotting O2 time series"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 1"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 3"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 5"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 7"
[1] "NOT ENOUGH DATA TO DO CO2 FLUSHING CORR, POS: 9"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 1"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 3"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 5"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 7"
[1] "NOT ENOUGH DATA TO DO O2 FLUSHING CORR, POS: 9"
[1] "plotting unknown co2"
[1] "plotting unknown o2"
[1] "plotting known co2"
[1] "plotting known o2"
[1] "plotting all variables"
[1] "plotting standard deviations"
[1] "plotting slopes"
[1] "plotting CO2 fits"
[1] "plotting O2 fits"
[1] "calculating switching times"
[1] "plotting co2 switching times"
[1] "plotting o2 switching times"
[1] "plotting co2 results"
[1] "plotting o2 results"
[1] "plotting average residuals"
[1] "making html"
[1] "making index html"
