Read 87300 records [1] "Analyzing 131022b.mr" [1] "Reading in data" Read 21825 records [1] "Approximately 97 jogs" [1] "Fixing CO2 glitches" Read 21825 records [1] "Finding cylinder IDs" [1] "Position 1 Cylinder ND12042" [1] "Position 2 Cylinder CA07857" [1] "Position 3 Cylinder CA06308" [1] "Position 4 Cylinder D801293" [1] "Position 5 Cylinder D743659" [1] "Position 6 Cylinder CA07809" [1] "Position 7 Cylinder ND19515" [1] "Position 8 Cylinder CC71581" [1] "Position 9 Cylinder ND19677" [1] "Position 10 Cylinder CA07825" [1] "Position 11 Cylinder D743653" [1] "Position 12 Cylinder D743661" [1] "Position 13 Cylinder NA" [1] "Position 14 Cylinder NA" [1] "Position 15 Cylinder NA" [1] "Position 16 Cylinder NA" Read 16 records LIST_KNOWN: CA07857 CA06308 CA07809 CA07825 LIST_UNKNOWN: ND12042 D801293 D743659 ND19515 CC71581 ND19677 D743653 D743661 Read 57 records Read 16 records Read 141 records Read 2 items [1] "Processing jog 1 at position 1" [1] "Processing jog 2 at position 226" [1] "Processing jog 3 at position 451" [1] "Processing jog 4 at position 676" [1] "Processing jog 5 at position 901" [1] "Processing jog 6 at position 1126" [1] "Processing jog 7 at position 1351" [1] "Processing jog 8 at position 1576" [1] "Processing jog 9 at position 1801" [1] "Processing jog 10 at position 2026" [1] "Processing jog 11 at position 2251" [1] "Processing jog 12 at position 2476" [1] "Processing jog 13 at position 2701" [1] "Processing jog 14 at position 2926" [1] "Processing jog 15 at position 3151" [1] "Processing jog 16 at position 3376" [1] "Processing jog 17 at position 3601" [1] "Processing jog 18 at position 3826" [1] "Processing jog 19 at position 4051" [1] "Processing jog 20 at position 4276" [1] "Processing jog 21 at position 4501" [1] "Processing jog 22 at position 4726" [1] "Processing jog 23 at position 4951" [1] "Processing jog 24 at position 5176" [1] "Processing jog 25 at position 5401" [1] "Processing jog 26 at position 5626" [1] "Processing jog 27 at position 5851" [1] "Processing jog 28 at position 6076" [1] "Processing jog 29 at position 6301" [1] "Processing jog 30 at position 6526" [1] "Processing jog 31 at position 6751" [1] "Processing jog 32 at position 6976" [1] "Processing jog 33 at position 7201" [1] "Processing jog 34 at position 7426" [1] "Processing jog 35 at position 7651" [1] "Processing jog 36 at position 7876" [1] "Processing jog 37 at position 8101" [1] "Processing jog 38 at position 8326" [1] "Processing jog 39 at position 8551" [1] "Processing jog 40 at position 8776" [1] "Processing jog 41 at position 9001" [1] "Processing jog 42 at position 9226" [1] "Processing jog 43 at position 9451" [1] "Processing jog 44 at position 9676" [1] "Processing jog 45 at position 9901" [1] "Processing jog 46 at position 10126" [1] "Processing jog 47 at position 10351" [1] "Processing jog 48 at position 10576" [1] "Processing jog 49 at position 10801" [1] "Processing jog 50 at position 11026" [1] "Processing jog 51 at position 11251" [1] "Processing jog 52 at position 11476" [1] "Processing jog 53 at position 11701" [1] "Processing jog 54 at position 11926" [1] "Processing jog 55 at position 12151" [1] "Processing jog 56 at position 12376" [1] "Processing jog 57 at position 12601" [1] "Processing jog 58 at position 12826" [1] "Processing jog 59 at position 13051" [1] "Processing jog 60 at position 13276" [1] "Processing jog 61 at position 13501" [1] "Processing jog 62 at position 13726" [1] "Processing jog 63 at position 13951" [1] "Processing jog 64 at position 14176" [1] "Processing jog 65 at position 14401" [1] "Processing jog 66 at position 14626" [1] "Processing jog 67 at position 14851" [1] "Processing jog 68 at position 15076" [1] "Processing jog 69 at position 15301" [1] "Processing jog 70 at position 15526" [1] "Processing jog 71 at position 15751" [1] "Processing jog 72 at position 15976" [1] "Processing jog 73 at position 16201" [1] "Processing jog 74 at position 16426" [1] "Processing jog 75 at position 16651" [1] "Processing jog 76 at position 16876" [1] "Processing jog 77 at position 17101" [1] "Processing jog 78 at position 17326" [1] "Processing jog 79 at position 17551" [1] "Processing jog 80 at position 17776" [1] "Processing jog 81 at position 18001" [1] "Processing jog 82 at position 18226" [1] "Processing jog 83 at position 18451" [1] "Processing jog 84 at position 18676" [1] "Processing jog 85 at position 18901" [1] "Processing jog 86 at position 19126" [1] "Processing jog 87 at position 19351" [1] "Processing jog 88 at position 19576" [1] "Processing jog 89 at position 19801" [1] "Processing jog 90 at position 20026" [1] "Processing jog 91 at position 20251" [1] "Processing jog 92 at position 20476" [1] "Processing jog 93 at position 20701" [1] "Processing jog 94 at position 20926" [1] "Processing jog 95 at position 21151" [1] "Processing jog 96 at position 21376" [1] "Processing jog 97 at position 21601" [1] "O2 SCL O2OFF CO2SCL CO2OFF (1ST ESTIMATE FROM MEAN FIT)" X Intercept x2 x1 -0.69 -754.47 1.16 404.06 [1] "Screened jogs for high CO2 standard deviation:" [,1] [,2] [,3] x2 295.873292 2 0.0458440734 [1] "Screened jogs for high O2 standard deviation:" [,1] [,2] [,3] [1,] 295.873292 2 41.3703386 [2,] 295.878500 1 938.7824699 [3,] 295.883709 2 30.1154242 [4,] 295.888917 3 2283.7420709 [5,] 295.894126 4 3438.0374874 [6,] 295.899334 5 729.4826131 [7,] 295.904542 6 233.4506032 [8,] 295.909751 7 1102.9417083 [9,] 295.914959 8 1586.6360223 [10,] 295.920168 9 1920.0672174 [11,] 295.925376 10 297.8266847 [12,] 295.930585 11 1343.5622129 [13,] 295.935793 12 1771.6473868 [14,] 295.941002 12 643.5573769 [15,] 295.951419 10 1005.4668817 [16,] 295.982670 4 17.5569988 [17,] 295.987878 3 19.7679943 [18,] 295.998295 1 75.1228746 [19,] 296.008712 2 307.0172948 [20,] 296.013920 3 28.1295026 [21,] 296.029546 6 16.0668127 [22,] 296.039963 8 63.8415079 [23,] 296.045171 9 29.4916400 [24,] 296.060797 12 144.1058478 [25,] 296.066005 12 1679.3976449 [26,] 296.071213 11 28.3203205 [27,] 296.076422 10 686.6070426 [28,] 296.081630 9 356.7559234 [29,] 296.092047 7 63.6562615 [30,] 296.097256 6 23.4566764 [31,] 296.102464 5 22.2305696 [32,] 296.107673 4 28.9701162 [33,] 296.112881 3 76.5999082 [34,] 296.118090 2 296.2661651 [35,] 296.123298 1 201.2317092 [36,] 296.128507 1 60.3139815 [37,] 296.133715 2 42.1675877 [38,] 296.138924 3 2963.4161938 [39,] 296.144132 4 493.5750452 [40,] 296.149341 5 20.3719872 [41,] 296.154549 6 2620.4555425 [42,] 296.159757 7 762.4445629 [43,] 296.164966 8 411.8315591 [44,] 296.170174 9 3502.0441188 [45,] 296.175383 10 1635.4063634 [46,] 296.180591 11 146.5752864 [47,] 296.185800 12 467.7411985 [48,] 296.196217 11 16.6220928 [49,] 296.201425 10 15.4142709 [50,] 296.206634 9 395.3200047 [51,] 296.211842 8 207.0606588 [52,] 296.237885 3 122.1068502 [53,] 296.243093 2 23.2470731 [54,] 296.258718 2 17.6700647 [55,] 296.269135 4 2708.4176818 [56,] 296.274344 5 102.8432868 [57,] 296.279552 6 27.1129579 [58,] 296.300386 10 139.2124545 [59,] 296.310803 12 20.7871308 [60,] 296.331637 9 154.4033377 [61,] 296.336845 8 182.3706005 [62,] 296.342054 7 264.2889184 [63,] 296.347262 6 634.0860436 [64,] 296.352471 5 61.5777008 [65,] 296.357679 4 21.3876649 [66,] 296.362888 3 15.4108206 [67,] 296.368096 2 15.1252938 [1] "calculating fits" [1] "plotting CO2 cal parameters" [1] "plotting O2 cal parameters" [1] "calculating final numbers" [1] "O2 SCL O2OFF CO2SCL CO2OFF (2ND ESTIMATE FROM MEAN OF ALL FITS)" [1] -0.70 -706.48 1.15 404.12 [1] "plotting CO2 time series" [1] "plotting O2 time series" [1] "plotting CO2 flushing effect" [1] "plotting O2 flushing effect" [1] "plotting unknown co2" [1] "plotting unknown o2" [1] "plotting known co2" [1] "plotting known o2" [1] "plotting all variables" [1] "plotting standard deviations" [1] "plotting slopes" [1] "plotting CO2 fits" [1] "plotting O2 fits" [1] "calculating switching times" [1] "plotting co2 switching times" [1] "plotting co2 rollover" [1] "plotting o2 switching times" [1] "plotting o2 rollover" [1] "plotting co2 results" [1] "plotting o2 results" [1] "plotting average residuals" [1] "making html" [1] "making index html" [1] "ND12042" Read 2321 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CA07857" Read 2321 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "CA06308" Read 2321 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D801293" Read 2321 records Read 2328 records Read 141 records [1] "plotting cylinder history" [1] "making html" [1] "D743659" Read 2321 records Read 2328 records Read 141 records [1] "plotting cylinder history" Error in plot.window(...) : need finite 'xlim' values Read 2328 records